LifeStrands Genomics Australia offers a variety of molecular tests including cutting edge Next Generation Sequencing assays (under the trademark OncoStrands® brand), various PCR based tests, and relevant immunohistochemical stains.
Next Generation Sequencing Assays
- OncoStrands® Essential Combined (DNA + CNV +
Fusions) (brochure)
- A 50 gene targeted NGS panel covering key cancer related genes for different tumour types including those in lung, colon, skin (melanoma), urinary bladder, thyroid, brain, etc. The panel covers DNA hotspots from 45 genes, CNVs from 14 genes and fusions from 18 genes.
- OncoStrands® Essential DNA
- This assay covers the DNA only (mutations and CNV) component of the above assay and can be performed as a standalone test.
- OncoStrands® Essential Fusion (RNA – Fusions
only)
- This assay covers the RNA only (fusions) component of the above assay and can be performed as a standalone test.
- OncoStrands® DNA 68
- A 68 gene hybrid capture DNA NGS panel with coverage of full coding regions of 68 key cancer related genes (plus TERT promoter region) including BRCA1 and BRCA2. Can be ordered in combination with the Essential Fusion Panel (please see above) if screening for fusions is clinically important.
- OncoStrands® Extended ( brochure
)
- A 108 gene hybrid capture DNA NGS panel with a coverage of full coding regions of 103 genes, including BRCA1 and BRCA 2, and many other DNA damage repair genes. The assay also provides accurate MSI score. The gene contents are particularly useful for tumours in prostate, breast, ovary and fallopian tube, pancreas, biliary tract, uterus, and colon. Can be ordered in combination with the Essential Fusion Panel (see above) if screening for fusions is clinically important.
- OncoStrands® Comprehensive Fusion (RNA – Fusions
only)
- This is the Illumina TruSight™ RNA Fusion Panel. The assay offers comprehensive analysis of known and novel fusion transcripts in 501 genes and is well suited for genomic profiling of fusions in a pan-cancer setting, particularly for all types of sarcomas.
- OncoStrands® Comprehensive (
brochure )
- This is the Illumina TSO500 Panel offering comprehensive genomic analysis of 523 genes and targets SNVs, CNVs, fusions, MSI, and TMB. The assay provides an extensive coverage of NCCN biomarker testing guidelines, genes associated with FDA approved targeted therapies, and clinical trials matching for a variety of tumours.
- OncoStrands Comprehensive HRD
- This is the Illumina TSO500 HRD Panel offering comprehensive genomic analysis of 523 genes and targets SNVs, CNVs, fusions, MSI, TMB, and HRD. The assay provides an extensive coverage of NCCN biomarker testing guidelines, genes associated with FDA approved targeted therapies, and clinical trials matching for a variety of tumours. Additionally, tumour HRD status is determined to guide PARPi therapies.
- OncoStrands Neuro-Oncology
- A 100 gene hybrid capture DNA NGS panel covering the full coding regions of 94 genes, hotspot regions in 5 genes, and selected TERT promoter alterations to assist CNS tumour classification as per the WHO 2021 guidelines. Additionally, the assay detects chromosome level copy number changes in chromosomes 1p, 6, 7, 9, 10, 16, 17 and 19q. This panel is suitable for testing both adult and paediatric CNS tumours.
Gene List for NGS Panels
- This ( link ) includes the list of all genes in our NGS panels.
PCR based Assays
- MLH1 Promoter Methylation
- MGMT Promoter Methylation
Immunohistochemical Stains
- ALK
- ROS1
- MMR (MLH1, PMS2, MSH2, MSH6)
Stuff
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